![]() The script runs all necessary scripts of the miRDeep2 package to perform a microRNA detection deep sequencing data anlysis. Wrapper function for the program package. miRNA identification is done by the script. Quantification and expression profiling is done by the script. ![]() ![]() Preprocessing is performed with the script. Colorspace sequencing data is currently not supported by the preprocessing module but it is planed to be implemented. Last, a new module for preprocessing of raw Illumina sequencing data produces files for downstream analysis with the miRDeep2 or quantifier module. Furthermore, it can be used for miRNA expression profiling across samples. MiRDeep2 is a software package for identification of novel and known miRNAs in deep sequencing data.
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